更新:2026-08-08 16:40

89株黏细菌糖代谢能力平台 · Step3+共线性+ML最终版

最终流程:Step1/2/3 注释 → 共线性 ABCD 分级 → B/C/D 蛋白 3Di-ML 验证。判定口径:A 级直接支持;B/C/D 中 ML_positive 与 borderline 均计为支持,ML_negative 不计支持,no_model 单独保留。

581
最终支持蛋白 / 605
19
高能力菌株(6–9模块)
55
中等能力菌株(3–5模块)
12
低能力菌株(1–2模块)
3
未检出最终支持模块
12+12
ML不支持 + no_model 蛋白

9个糖代谢模块在89株中的最终分布

clustermodule_cnstrains_ML_verifiedstrains_totalML_verified_percent
C_FruTag_fusion果糖/Tagatose PTS 融合模块808989.8876404494382
A_GlcNag_fusion葡萄糖/氨基糖 PTS 融合模块788987.64044943820225
B_ManSor甘露糖/山梨糖 PTS 模块658973.03370786516854
G_TreMal_ABC海藻糖/麦芽糖 ABC 模块608967.41573033707866
E_TreS_Mak_GlgE海藻糖-麦芽糖/GlgE 模块428947.19101123595505
I_Gal_Xyloside_ABC半乳糖/木糖苷 ABC 模块168917.97752808988764
H_Xylulose_Polyol_ABC木酮糖/多元醇 ABC 模块168917.97752808988764
F_Arabinose_ABC阿拉伯糖 ABC 模块158916.853932584269664
D_Xylose木糖模块118912.359550561797752

糖代谢能力最强菌株

strainML_verified_modulesmodules_with_strong_clinkercapacity_tier
CC21.all99high_6_9
Cbm699high_6_9
Cy1.all99high_6_9
Cy9.all98high_6_9
DSM226299high_6_9
DSM5265599high_6_9
A1588high_6_9
A888high_6_9
AC1988high_6_9
NCWAL0188high_6_9
ATCC2903777high_6_9
D1P277high_6_9
DW43-177high_6_9
H1.all75high_6_9
S1.all77high_6_9
5N47864high_6_9
ContRs11664high_6_9
GDMCC1312464high_6_9
H31665high_6_9
17bor1454medium_3_5

糖代谢能力最低菌株

strainML_verified_modulesmodules_with_strong_clinkercapacity_tier
AH0300none
HKSTASMYXO2400none
HyVt46300none
Afasciculatus11low_1_2
SMAGU1075110low_1_2
SMAGU1337311low_1_2
SMAGU1365410low_1_2
ACEMYX1020low_1_2
CCM760921low_1_2
CCUG5194321low_1_2
JCM1513621low_1_2
SMAGU1043820low_1_2
Sora8320low_1_2
TGSMYX320low_1_2
clean13820low_1_2

89株 × 9模块最终矩阵

strainA_GlcNag_fusionB_ManSorC_FruTag_fusionD_XyloseE_TreS_Mak_GlgEF_Arabinose_ABCG_TreMal_ABCH_Xylulose_Polyol_ABCI_Gal_Xyloside_ABC
07C
14696
15dZY3bin51
17bor14
2CP1
341R
3LFB2
5N478
5N486
A15
A8
AB016
AB023
AC19
ACEMYX10
AH03
AM005
AMRMDS5650
ATCC29037
Afasciculatus
Ag1.all
Ag2
BDFP2
C2bin32
CA032A
CC10
CC21.all
CC8
CCM7609
CCUG51943
Cbm6
Cmc5
ContRs116
Cy1.all
Cy9.all
D1P2
DK1622
DSM15201
DSM2261
DSM2262
DSM22710
DSM24000
DSM436
DSM52655
DSM53668
DSM71
DW43-1
DZF1
EGB
GCF_015354265.1_ASM1535426v1_genomic
GDMCC13124
H1.all
H316
HKSTASMYXO24
HyVt463
JCM15136
KYC3313
M27
NCWAL01
NannocystineaeF01
NannocystineaeH01
NannocystineaeSLJ
P2
Pajaroellobacter_abortibovis
Pendulispora_albinea
Pendulispora_brunnea
Pendulispora_rubella
S1.all
SDU13
SIR1
SMAGU10438
SMAGU10751
SMAGU11958
SMAGU12973
SMAGU13373
SMAGU13654
SMAGU13669
SMAGU4926
SRP1506987
SWB005
SZUA566
So0003192
Soce10
Sora83
TGSMYX3
V1
WMMC2535
clean138
cluster1bin384

数据与记录

本页配套文件:latest_ml_verified_platform_data.jsonfinal_89strains_capacity_summary.csvfinal_module_prevalence_summary.csvWORK_RECORD_2026-08-08_ML_verified_platform.md

注:该页面汇总的是9个共线性模块的最终平台能力,不等同于旧版15种单糖底物规则页面;旧版 Step1/2/3 酶规则仍作为上游注释来源保留。